Michael A. Skinnider (2024) Highlighted by Jan Jensen Figure 3c from the paper. (c) The author. Reproduced under the CC-BY LicenseLanguage models (LMs) don't always produce valid SMILES and while for modern methods the percentage of invalid SMILES tends to be relatively small, much effort has been expended on making it as small as possible. SELFIES...

Philipp M. Pflüger, Marius Kühnemund, Felix Katzenburg, Herbert Kuchen, and Frank Glorius (2024) Highlighted by Jan Jensen Parts of Figures 2 and 6 combined. (c) 2024 Elsevier, Inc This paper presents a very novel approach to XAI that allows for direct comparison with chemical intuition. Molecular fingerprints (either binary or count) are defined using...

Jason D. Shields, Rachel Howells, Gillian Lamont, Yin Leilei, Andrew Madin, Christopher E. Reimann, Hadi Rezaei, Tristan Reuillon, Bryony Smith, Clare Thomson, Yuting Zhengc and Robert E. Ziegler (2024) Highlighted by Jan Jensen Figure 3 from this paper (c) the authors 2020. Reproduced under the CC-BY licenseThis is one of the rare papers where experimental...

Thijs Stuyver (2024) Highlighted by Jan Jensen Figure 2 from the paper. (c) the author 2024 reproduced under the CC-BY-NC-ND licence This paper caught my eye for several reasons. It's an open source implementation of Maeda's AFIR method, but modified for double-ended TS searches. The setup is completely automated and interfaced to  xTB so it is fast....

Chenru Duan, Yuanqi Du, Haojun Jia, and Heather J. Kulik (2023) Highlighted by Jan Jensen Part of Figure 1 from the paper. As anyone who has tried it will know, finding TSs is one of the most difficult, fiddly, and frustrating tasks in computational chemistry. While there are several methods aimed at automating the process, they tend to have a mixed...

Federico Zipoli, Carlo Baldassari, Matteo Manica, Jannis Born, and Teodoro Laino (2023) Highlighted by Jan Jensen Part of Figure 10 from the paper. (c) The authors 2023. Reproduced under the CC-NC-ND Prediction of retrosynthetic reaction trees are typically done by stringing together individual retrosynthetic steps that have the highest predicted confidences....